[build-status: 168979] Log for failed build of autodocksuite_4.0.1-4 (dist=unstable)

Build Daemon 2 buildd2 at linux-m32r.org
Fri Sep 5 14:34:35 JST 2008


Automatic build of autodocksuite_4.0.1-4 on mappi005 by sbuild/m32r 98-farm
Build started at 20080905-1325
******************************************************************************
Checking available source versions...
Fetching source files...
Reading package lists...
Building dependency tree...
Reading state information...
Need to get 1907kB of source archives.
Get:1 http://debian.linux-m32r.org 06_devonian/main autodocksuite 4.0.1-4 (dsc) [1398B]
Get:2 http://debian.linux-m32r.org 06_devonian/main autodocksuite 4.0.1-4 (tar) [1898kB]
Get:3 http://debian.linux-m32r.org 06_devonian/main autodocksuite 4.0.1-4 (diff) [7289B]
Fetched 1907kB in 27s (68.4kB/s)
Download complete and in download only mode
** Using build dependencies supplied by package:
Build-Depends: debhelper (>= 5), quilt
Checking for already installed source dependencies...
debhelper: already installed (7.0.17 >= 5 is satisfied)
quilt: already installed (0.46-6)
Checking for source dependency conflicts...
Checking correctness of source dependencies...
Toolchain package versions: libc6-dev_2.3.6.ds1-13 linux-kernel-headers_2.6.18-7 gcc-4.1_4.1.1-21 g++-4.1_4.1.1-21 binutils_2.18.1~cvs20080103-1 libstdc++6-4.1-dev_4.1.1-21 libstdc++6_4.1.1-21
------------------------------------------------------------------------------
dpkg-source: extracting autodocksuite in autodocksuite-4.0.1
dpkg-source: info: unpacking autodocksuite_4.0.1.orig.tar.gz
dpkg-source: info: applying autodocksuite_4.0.1-4.diff.gz
dpkg-buildpackage: set CFLAGS to default value: -g -O2
dpkg-buildpackage: set CPPFLAGS to default value: 
dpkg-buildpackage: set LDFLAGS to default value: 
dpkg-buildpackage: set FFLAGS to default value: -g -O2
dpkg-buildpackage: set CXXFLAGS to default value: -g -O2
dpkg-buildpackage: source package autodocksuite
dpkg-buildpackage: source version 4.0.1-4
dpkg-buildpackage: host architecture m32r
 /usr/bin/fakeroot debian/rules clean
QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null pop -a -R || test $? = 2 
No patch removed
rm -rf .pc debian/stamp-patched
dh_testdir
dh_testroot
rm -f build-arch-stamp build-indep-stamp configure-stamp
# Add here commands to clean up after the build process.
for d in src/autodock src/autogrid; \
	do \
	   if [ -r $d/Makefile ]; then /usr/bin/make -C $d distclean; fi \
	done
dh_clean configure-stamp
 debian/rules build
# quilt exits with 2 as return when there was nothing to do. 
# That's not an error here (but it's useful to break loops in crude scripts)
QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null push -a || test $? = 2
Applying patch addHelp.patch
patching file src/autogrid/setflags.cpp

Applying patch gcc43-compatibility.patch
patching file src/autogrid/check_size.cpp

Now at patch gcc43-compatibility.patch
touch debian/stamp-patched
dh_testdir
# Add here commands to configure the package.
for d in autodock autogrid; do \
	   (cd src/$d && ./configure CFLAGS="-Wall -g -O2" --prefix=/usr) ; \
	done
checking for a BSD-compatible install... /usr/bin/ginstall -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for gawk... (cached) gawk
checking for g++... g++
checking for C++ compiler default output file name... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... gcc3
checking for a BSD-compatible install... /usr/bin/ginstall -c
checking for ranlib... ranlib
checking build system type... m32r-unknown-linux-gnu
checking host system type... m32r-unknown-linux-gnu
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking for size_t... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for gethostname... yes
checking for pow... no
checking for sqrt... no
checking for strncasecmp... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: executing depfiles commands
checking for a BSD-compatible install... /usr/bin/ginstall -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for g++... g++
checking for C++ compiler default output file name... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... gcc3
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking dependency style of gcc... gcc3
checking for sqrt in -lm... yes
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for an ANSI C-conforming const... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for gethostname... yes
checking for pow... yes
checking for round... yes
checking for sqrt... yes
checking for strncasecmp... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: executing depfiles commands
touch configure-stamp
# Add here commands to compile the arch part of the package.
for d in src/autodock src/autogrid; do /usr/bin/make -C $d; done
make[1]: Entering directory `/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1'
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT analysis.o -MD -MP -MF .deps/analysis.Tpo -c -o analysis.o analysis.cc
mv -f .deps/analysis.Tpo .deps/analysis.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT atom_parameter_manager.o -MD -MP -MF .deps/atom_parameter_manager.Tpo -c -o atom_parameter_manager.o atom_parameter_manager.cc
mv -f .deps/atom_parameter_manager.Tpo .deps/atom_parameter_manager.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT banner.o -MD -MP -MF .deps/banner.Tpo -c -o banner.o banner.cc
mv -f .deps/banner.Tpo .deps/banner.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT bestpdb.o -MD -MP -MF .deps/bestpdb.Tpo -c -o bestpdb.o bestpdb.cc
mv -f .deps/bestpdb.Tpo .deps/bestpdb.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT calculateEnergies.o -MD -MP -MF .deps/calculateEnergies.Tpo -c -o calculateEnergies.o calculateEnergies.cc
mv -f .deps/calculateEnergies.Tpo .deps/calculateEnergies.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT call_glss.o -MD -MP -MF .deps/call_glss.Tpo -c -o call_glss.o call_glss.cc
mv -f .deps/call_glss.Tpo .deps/call_glss.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT call_gs.o -MD -MP -MF .deps/call_gs.Tpo -c -o call_gs.o call_gs.cc
mv -f .deps/call_gs.Tpo .deps/call_gs.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT call_ls.o -MD -MP -MF .deps/call_ls.Tpo -c -o call_ls.o call_ls.cc
mv -f .deps/call_ls.Tpo .deps/call_ls.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT changeState.o -MD -MP -MF .deps/changeState.Tpo -c -o changeState.o changeState.cc
mv -f .deps/changeState.Tpo .deps/changeState.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT check_header_float.o -MD -MP -MF .deps/check_header_float.Tpo -c -o check_header_float.o check_header_float.cc
mv -f .deps/check_header_float.Tpo .deps/check_header_float.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT check_header_int.o -MD -MP -MF .deps/check_header_int.Tpo -c -o check_header_int.o check_header_int.cc
mv -f .deps/check_header_int.Tpo .deps/check_header_int.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT check_header_line.o -MD -MP -MF .deps/check_header_line.Tpo -c -o check_header_line.o check_header_line.cc
mv -f .deps/check_header_line.Tpo .deps/check_header_line.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT cluster_analysis.o -MD -MP -MF .deps/cluster_analysis.Tpo -c -o cluster_analysis.o cluster_analysis.cc
mv -f .deps/cluster_analysis.Tpo .deps/cluster_analysis.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT clmode.o -MD -MP -MF .deps/clmode.Tpo -c -o clmode.o clmode.cc
mv -f .deps/clmode.Tpo .deps/clmode.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT cmdmode.o -MD -MP -MF .deps/cmdmode.Tpo -c -o cmdmode.o cmdmode.cc
mv -f .deps/cmdmode.Tpo .deps/cmdmode.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT cnv_state_to_coords.o -MD -MP -MF .deps/cnv_state_to_coords.Tpo -c -o cnv_state_to_coords.o cnv_state_to_coords.cc
mv -f .deps/cnv_state_to_coords.Tpo .deps/cnv_state_to_coords.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT com.o -MD -MP -MF .deps/com.Tpo -c -o com.o com.cc
mv -f .deps/com.Tpo .deps/com.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT conformation_sampler.o -MD -MP -MF .deps/conformation_sampler.Tpo -c -o conformation_sampler.o conformation_sampler.cc
mv -f .deps/conformation_sampler.Tpo .deps/conformation_sampler.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT distdepdiel.o -MD -MP -MF .deps/distdepdiel.Tpo -c -o distdepdiel.o distdepdiel.cc
mv -f .deps/distdepdiel.Tpo .deps/distdepdiel.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT stateLibrary.o -MD -MP -MF .deps/stateLibrary.Tpo -c -o stateLibrary.o stateLibrary.cc
mv -f .deps/stateLibrary.Tpo .deps/stateLibrary.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT readfield.o -MD -MP -MF .deps/readfield.Tpo -c -o readfield.o readfield.cc
mv -f .deps/readfield.Tpo .deps/readfield.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT readmap.o -MD -MP -MF .deps/readmap.Tpo -c -o readmap.o readmap.cc
mv -f .deps/readmap.Tpo .deps/readmap.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT readPDBQT.o -MD -MP -MF .deps/readPDBQT.Tpo -c -o readPDBQT.o readPDBQT.cc
mv -f .deps/readPDBQT.Tpo .deps/readPDBQT.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT read_parameter_library.o -MD -MP -MF .deps/read_parameter_library.Tpo -c -o read_parameter_library.o read_parameter_library.cc
mv -f .deps/read_parameter_library.Tpo .deps/read_parameter_library.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT eval.o -MD -MP -MF .deps/eval.Tpo -c -o eval.o eval.cc
mv -f .deps/eval.Tpo .deps/eval.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT gencau.o -MD -MP -MF .deps/gencau.Tpo -c -o gencau.o gencau.cc
mv -f .deps/gencau.Tpo .deps/gencau.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT getrms.o -MD -MP -MF .deps/getrms.Tpo -c -o getrms.o getrms.cc
mv -f .deps/getrms.Tpo .deps/getrms.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT get_atom_type.o -MD -MP -MF .deps/get_atom_type.Tpo -c -o get_atom_type.o get_atom_type.cc
mv -f .deps/get_atom_type.Tpo .deps/get_atom_type.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT getInitialState.o -MD -MP -MF .deps/getInitialState.Tpo -c -o getInitialState.o getInitialState.cc
mv -f .deps/getInitialState.Tpo .deps/getInitialState.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT getpdbcrds.o -MD -MP -MF .deps/getpdbcrds.Tpo -c -o getpdbcrds.o getpdbcrds.cc
mv -f .deps/getpdbcrds.Tpo .deps/getpdbcrds.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -DCHECK_ISNAN -c ./gs.cc
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT initautodock.o -MD -MP -MF .deps/initautodock.Tpo -c -o initautodock.o initautodock.cc
mv -f .deps/initautodock.Tpo .deps/initautodock.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT input_state.o -MD -MP -MF .deps/input_state.Tpo -c -o input_state.o input_state.cc
mv -f .deps/input_state.Tpo .deps/input_state.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT investigate.o -MD -MP -MF .deps/investigate.Tpo -c -o investigate.o investigate.cc
mv -f .deps/investigate.Tpo .deps/investigate.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT linpack.o -MD -MP -MF .deps/linpack.Tpo -c -o linpack.o linpack.cc
mv -f .deps/linpack.Tpo .deps/linpack.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT ls.o -MD -MP -MF .deps/ls.Tpo -c -o ls.o ls.cc
mv -f .deps/ls.Tpo .deps/ls.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT mapping.o -MD -MP -MF .deps/mapping.Tpo -c -o mapping.o mapping.cc
mv -f .deps/mapping.Tpo .deps/mapping.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT minmeanmax.o -MD -MP -MF .deps/minmeanmax.Tpo -c -o minmeanmax.o minmeanmax.cc
mv -f .deps/minmeanmax.Tpo .deps/minmeanmax.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT mkNewState.o -MD -MP -MF .deps/mkNewState.Tpo -c -o mkNewState.o mkNewState.cc
mv -f .deps/mkNewState.Tpo .deps/mkNewState.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT mkTorTree.o -MD -MP -MF .deps/mkTorTree.Tpo -c -o mkTorTree.o mkTorTree.cc
mv -f .deps/mkTorTree.Tpo .deps/mkTorTree.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT mkRandomState.o -MD -MP -MF .deps/mkRandomState.Tpo -c -o mkRandomState.o mkRandomState.cc
mv -f .deps/mkRandomState.Tpo .deps/mkRandomState.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT nonbonds.o -MD -MP -MF .deps/nonbonds.Tpo -c -o nonbonds.o nonbonds.cc
mv -f .deps/nonbonds.Tpo .deps/nonbonds.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT openfile.o -MD -MP -MF .deps/openfile.Tpo -c -o openfile.o openfile.cc
mv -f .deps/openfile.Tpo .deps/openfile.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT output_state.o -MD -MP -MF .deps/output_state.Tpo -c -o output_state.o output_state.cc
mv -f .deps/output_state.Tpo .deps/output_state.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT parse_com_line.o -MD -MP -MF .deps/parse_com_line.Tpo -c -o parse_com_line.o parse_com_line.cc
mv -f .deps/parse_com_line.Tpo .deps/parse_com_line.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT parse_dpf_line.o -MD -MP -MF .deps/parse_dpf_line.Tpo -c -o parse_dpf_line.o parse_dpf_line.cc
mv -f .deps/parse_dpf_line.Tpo .deps/parse_dpf_line.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT parse_param_line.o -MD -MP -MF .deps/parse_param_line.Tpo -c -o parse_param_line.o parse_param_line.cc
mv -f .deps/parse_param_line.Tpo .deps/parse_param_line.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT parse_PDBQT_line.o -MD -MP -MF .deps/parse_PDBQT_line.Tpo -c -o parse_PDBQT_line.o parse_PDBQT_line.cc
mv -f .deps/parse_PDBQT_line.Tpo .deps/parse_PDBQT_line.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT parse_trj_line.o -MD -MP -MF .deps/parse_trj_line.Tpo -c -o parse_trj_line.o parse_trj_line.cc
mv -f .deps/parse_trj_line.Tpo .deps/parse_trj_line.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT parsetypes.o -MD -MP -MF .deps/parsetypes.Tpo -c -o parsetypes.o parsetypes.cc
mv -f .deps/parsetypes.Tpo .deps/parsetypes.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT print_2x.o -MD -MP -MF .deps/print_2x.Tpo -c -o print_2x.o print_2x.cc
mv -f .deps/print_2x.Tpo .deps/print_2x.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT print_atomic_energies.o -MD -MP -MF .deps/print_atomic_energies.Tpo -c -o print_atomic_energies.o print_atomic_energies.cc
mv -f .deps/print_atomic_energies.Tpo .deps/print_atomic_energies.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT print_avsfld.o -MD -MP -MF .deps/print_avsfld.Tpo -c -o print_avsfld.o print_avsfld.cc
mv -f .deps/print_avsfld.Tpo .deps/print_avsfld.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT writePDBQT.o -MD -MP -MF .deps/writePDBQT.Tpo -c -o writePDBQT.o writePDBQT.cc
mv -f .deps/writePDBQT.Tpo .deps/writePDBQT.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT print_rem.o -MD -MP -MF .deps/print_rem.Tpo -c -o print_rem.o print_rem.cc
mv -f .deps/print_rem.Tpo .deps/print_rem.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT printdate.o -MD -MP -MF .deps/printdate.Tpo -c -o printdate.o printdate.cc
mv -f .deps/printdate.Tpo .deps/printdate.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT printEnergies.o -MD -MP -MF .deps/printEnergies.Tpo -c -o printEnergies.o printEnergies.cc
mv -f .deps/printEnergies.Tpo .deps/printEnergies.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT printhms.o -MD -MP -MF .deps/printhms.Tpo -c -o printhms.o printhms.cc
mv -f .deps/printhms.Tpo .deps/printhms.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT prClusterHist.o -MD -MP -MF .deps/prClusterHist.Tpo -c -o prClusterHist.o prClusterHist.cc
mv -f .deps/prClusterHist.Tpo .deps/prClusterHist.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT prInitialState.o -MD -MP -MF .deps/prInitialState.Tpo -c -o prInitialState.o prInitialState.cc
mv -f .deps/prInitialState.Tpo .deps/prInitialState.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT prTorConList.o -MD -MP -MF .deps/prTorConList.Tpo -c -o prTorConList.o prTorConList.cc
mv -f .deps/prTorConList.Tpo .deps/prTorConList.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT qmultiply.o -MD -MP -MF .deps/qmultiply.Tpo -c -o qmultiply.o qmultiply.cc
mv -f .deps/qmultiply.Tpo .deps/qmultiply.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT qtransform.o -MD -MP -MF .deps/qtransform.Tpo -c -o qtransform.o qtransform.cc
mv -f .deps/qtransform.Tpo .deps/qtransform.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT quicksort.o -MD -MP -MF .deps/quicksort.Tpo -c -o quicksort.o quicksort.cc
mv -f .deps/quicksort.Tpo .deps/quicksort.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT ranlib.o -MD -MP -MF .deps/ranlib.Tpo -c -o ranlib.o ranlib.cc
mv -f .deps/ranlib.Tpo .deps/ranlib.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT rep.o -MD -MP -MF .deps/rep.Tpo -c -o rep.o rep.cc
mv -f .deps/rep.Tpo .deps/rep.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT scauchy.o -MD -MP -MF .deps/scauchy.Tpo -c -o scauchy.o scauchy.cc
mv -f .deps/scauchy.Tpo .deps/scauchy.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT set_cmd_io_std.o -MD -MP -MF .deps/set_cmd_io_std.Tpo -c -o set_cmd_io_std.o set_cmd_io_std.cc
mv -f .deps/set_cmd_io_std.Tpo .deps/set_cmd_io_std.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT setflags.o -MD -MP -MF .deps/setflags.Tpo -c -o setflags.o setflags.cc
mv -f .deps/setflags.Tpo .deps/setflags.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT simanneal.o -MD -MP -MF .deps/simanneal.Tpo -c -o simanneal.o simanneal.cc
mv -f .deps/simanneal.Tpo .deps/simanneal.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT sort_enrg.o -MD -MP -MF .deps/sort_enrg.Tpo -c -o sort_enrg.o sort_enrg.cc
mv -f .deps/sort_enrg.Tpo .deps/sort_enrg.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT stop.o -MD -MP -MF .deps/stop.Tpo -c -o stop.o stop.cc
mv -f .deps/stop.Tpo .deps/stop.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT strindex.o -MD -MP -MF .deps/strindex.Tpo -c -o strindex.o strindex.cc
mv -f .deps/strindex.Tpo .deps/strindex.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT success.o -MD -MP -MF .deps/success.Tpo -c -o success.o success.cc
mv -f .deps/success.Tpo .deps/success.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT summarizegrids.o -MD -MP -MF .deps/summarizegrids.Tpo -c -o summarizegrids.o summarizegrids.cc
mv -f .deps/summarizegrids.Tpo .deps/summarizegrids.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT support.o -MD -MP -MF .deps/support.Tpo -c -o support.o support.cc
mv -f .deps/support.Tpo .deps/support.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT swap.o -MD -MP -MF .deps/swap.Tpo -c -o swap.o swap.cc
mv -f .deps/swap.Tpo .deps/swap.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT timesys.o -MD -MP -MF .deps/timesys.Tpo -c -o timesys.o timesys.cc
mv -f .deps/timesys.Tpo .deps/timesys.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT timesyshms.o -MD -MP -MF .deps/timesyshms.Tpo -c -o timesyshms.o timesyshms.cc
mv -f .deps/timesyshms.Tpo .deps/timesyshms.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT torNorVec.o -MD -MP -MF .deps/torNorVec.Tpo -c -o torNorVec.o torNorVec.cc
mv -f .deps/torNorVec.Tpo .deps/torNorVec.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT torsion.o -MD -MP -MF .deps/torsion.Tpo -c -o torsion.o torsion.cc
mv -f .deps/torsion.Tpo .deps/torsion.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT trilinterp.o -MD -MP -MF .deps/trilinterp.Tpo -c -o trilinterp.o trilinterp.cc
mv -f .deps/trilinterp.Tpo .deps/trilinterp.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT usage.o -MD -MP -MF .deps/usage.Tpo -c -o usage.o usage.cc
mv -f .deps/usage.Tpo .deps/usage.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT weedbonds.o -MD -MP -MF .deps/weedbonds.Tpo -c -o weedbonds.o weedbonds.cc
mv -f .deps/weedbonds.Tpo .deps/weedbonds.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT warn_bad_file.o -MD -MP -MF .deps/warn_bad_file.Tpo -c -o warn_bad_file.o warn_bad_file.cc
mv -f .deps/warn_bad_file.Tpo .deps/warn_bad_file.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT coliny.o -MD -MP -MF .deps/coliny.Tpo -c -o coliny.o coliny.cc
mv -f .deps/coliny.Tpo .deps/coliny.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT eintcal.o -MD -MP -MF .deps/eintcal.Tpo -c -o eintcal.o eintcal.cc
mv -f .deps/eintcal.Tpo .deps/eintcal.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT eintcalPrint.o -MD -MP -MF .deps/eintcalPrint.Tpo -c -o eintcalPrint.o eintcalPrint.cc
mv -f .deps/eintcalPrint.Tpo .deps/eintcalPrint.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT intnbtable.o -MD -MP -MF .deps/intnbtable.Tpo -c -o intnbtable.o intnbtable.cc
mv -f .deps/intnbtable.Tpo .deps/intnbtable.Po
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT nbe.o -MD -MP -MF .deps/nbe.Tpo -c -o nbe.o nbe.cc
mv -f .deps/nbe.Tpo .deps/nbe.Po
rm -f libad.a
ar cru libad.a analysis.o atom_parameter_manager.o banner.o bestpdb.o calculateEnergies.o call_glss.o call_gs.o call_ls.o changeState.o check_header_float.o check_header_int.o check_header_line.o cluster_analysis.o clmode.o cmdmode.o cnv_state_to_coords.o com.o conformation_sampler.o distdepdiel.o stateLibrary.o readfield.o readmap.o readPDBQT.o read_parameter_library.o eval.o gencau.o getrms.o get_atom_type.o getInitialState.o getpdbcrds.o gs.o initautodock.o input_state.o investigate.o linpack.o ls.o mapping.o minmeanmax.o mkNewState.o mkTorTree.o mkRandomState.o nonbonds.o openfile.o output_state.o parse_com_line.o parse_dpf_line.o parse_param_line.o parse_PDBQT_line.o parse_trj_line.o parsetypes.o print_2x.o print_atomic_energies.o print_avsfld.o writePDBQT.o print_rem.o printdate.o printEnergies.o printhms.o prClusterHist.o prInitialState.o prTorConList.o qmultiply.o qtransform.o quicksort.o ranlib.o rep.o scauchy.o set_cmd_io_std.o setflags.o simanneal.o sort_enrg.o sto
 p.o strindex.o success.o summarizegrids.o support.o swap.o timesys.o timesyshms.o torNorVec.o torsion.o trilinterp.o usage.o weedbonds.o warn_bad_file.o coliny.o eintcal.o eintcalPrint.o intnbtable.o nbe.o 
ranlib libad.a
g++ -DPACKAGE_NAME=\"autodock\" -DPACKAGE_TARNAME=\"autodock\" -DPACKAGE_VERSION=\"4.0.1\" -DPACKAGE_STRING=\"autodock\ 4.0.1\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autodock\" -DVERSION=\"4.0.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_STRNCASECMP=1 -I.  -DNOSQRT -DUSE_8A_NBCUTOFF -DDO_NOT_CROSSOVER_IN_QUAT -DWRITEPDBQSTATE -I./../acro/include   -Wall -O3  -g -O2 -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.cc
mv -f .deps/main.Tpo .deps/main.Po
g++ -Wall -O3  -g -O2   -o autodock4 main.o libad.a -lm 
main.o: In function `Eval::setup(float (*) [3], float*, float*, float*, int*, int, float (*) [128][128][22], float*, float*, nonbond_param*, energy_tables*, int, char, char, char*, char, unsigned short*, unsigned short (*) [256], float (*) [3], int (*) [2048], float (*) [3], float (*) [3], state, molecule, int*, char, float, parameter_entry*, float, grid_map_set_info*, char, char)':
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:178: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:200: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:205: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:205: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:210: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:219: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:213: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:215: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:217: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
main.o: In function `Eval::compute_intermol_energy(char)':
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:236: relocation truncated to fit: R_M32R_24_RELA against symbol `evaluate' defined in .bss section in libad.a(call_glss.o)
main.o: In function `Eval::setup(float (*) [3], float*, float*, float*, int*, int, float (*) [128][128][22], float*, float*, nonbond_param*, energy_tables*, int, char, char, char*, char, unsigned short*, unsigned short (*) [256], float (*) [3], int (*) [2048], float (*) [3], float (*) [3], state, molecule, int*, char, float, parameter_entry*, float, grid_map_set_info*, char, char)':
/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1/eval.h:212: additional relocation overflows omitted from the output
collect2: ld returned 1 exit status
make[1]: *** [autodock4] Error 1
make[1]: Leaving directory `/build/buildd2/autodocksuite-4.0.1/src/autodock-4.0.1'
make[1]: Entering directory `/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0'
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-main.o -MD -MP -MF .deps/autogrid4-main.Tpo -c -o autogrid4-main.o `test -f 'main.cpp' || echo './'`main.cpp
main.cpp: In function 'int main(int, char**)':
main.cpp:360: warning: 'invdielcal' may be used uninitialized in this function
main.cpp:353: warning: 'floating_grid_fileptr' may be used uninitialized in this function
main.cpp:352: warning: 'xyz_fileptr' may be used uninitialized in this function
main.cpp:351: warning: 'AVS_fld_fileptr' may be used uninitialized in this function
main.cpp:260: warning: 'gridmap' may be used uninitialized in this function
main.cpp:371: warning: 'r_min' may be used uninitialized in this function
mv -f .deps/autogrid4-main.Tpo .deps/autogrid4-main.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-check_size.o -MD -MP -MF .deps/autogrid4-check_size.Tpo -c -o autogrid4-check_size.o `test -f 'check_size.cpp' || echo './'`check_size.cpp
mv -f .deps/autogrid4-check_size.Tpo .deps/autogrid4-check_size.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-setflags.o -MD -MP -MF .deps/autogrid4-setflags.Tpo -c -o autogrid4-setflags.o `test -f 'setflags.cpp' || echo './'`setflags.cpp
mv -f .deps/autogrid4-setflags.Tpo .deps/autogrid4-setflags.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-timesys.o -MD -MP -MF .deps/autogrid4-timesys.Tpo -c -o autogrid4-timesys.o `test -f 'timesys.cpp' || echo './'`timesys.cpp
mv -f .deps/autogrid4-timesys.Tpo .deps/autogrid4-timesys.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-timesyshms.o -MD -MP -MF .deps/autogrid4-timesyshms.Tpo -c -o autogrid4-timesyshms.o `test -f 'timesyshms.cpp' || echo './'`timesyshms.cpp
mv -f .deps/autogrid4-timesyshms.Tpo .deps/autogrid4-timesyshms.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-printhms.o -MD -MP -MF .deps/autogrid4-printhms.Tpo -c -o autogrid4-printhms.o `test -f 'printhms.cpp' || echo './'`printhms.cpp
mv -f .deps/autogrid4-printhms.Tpo .deps/autogrid4-printhms.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-prHMSfixed.o -MD -MP -MF .deps/autogrid4-prHMSfixed.Tpo -c -o autogrid4-prHMSfixed.o `test -f 'prHMSfixed.cpp' || echo './'`prHMSfixed.cpp
mv -f .deps/autogrid4-prHMSfixed.Tpo .deps/autogrid4-prHMSfixed.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-printdate.o -MD -MP -MF .deps/autogrid4-printdate.Tpo -c -o autogrid4-printdate.o `test -f 'printdate.cpp' || echo './'`printdate.cpp
mv -f .deps/autogrid4-printdate.Tpo .deps/autogrid4-printdate.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-strindex.o -MD -MP -MF .deps/autogrid4-strindex.Tpo -c -o autogrid4-strindex.o `test -f 'strindex.cpp' || echo './'`strindex.cpp
mv -f .deps/autogrid4-strindex.Tpo .deps/autogrid4-strindex.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-banner.o -MD -MP -MF .deps/autogrid4-banner.Tpo -c -o autogrid4-banner.o `test -f 'banner.cpp' || echo './'`banner.cpp
mv -f .deps/autogrid4-banner.Tpo .deps/autogrid4-banner.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-gpfparser.o -MD -MP -MF .deps/autogrid4-gpfparser.Tpo -c -o autogrid4-gpfparser.o `test -f 'gpfparser.cpp' || echo './'`gpfparser.cpp
mv -f .deps/autogrid4-gpfparser.Tpo .deps/autogrid4-gpfparser.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-parsetypes.o -MD -MP -MF .deps/autogrid4-parsetypes.Tpo -c -o autogrid4-parsetypes.o `test -f 'parsetypes.cpp' || echo './'`parsetypes.cpp
mv -f .deps/autogrid4-parsetypes.Tpo .deps/autogrid4-parsetypes.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-atom_parameter_manager.o -MD -MP -MF .deps/autogrid4-atom_parameter_manager.Tpo -c -o autogrid4-atom_parameter_manager.o `test -f 'atom_parameter_manager.cpp' || echo './'`atom_parameter_manager.cpp
mv -f .deps/autogrid4-atom_parameter_manager.Tpo .deps/autogrid4-atom_parameter_manager.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-read_parameter_library.o -MD -MP -MF .deps/autogrid4-read_parameter_library.Tpo -c -o autogrid4-read_parameter_library.o `test -f 'read_parameter_library.cpp' || echo './'`read_parameter_library.cpp
mv -f .deps/autogrid4-read_parameter_library.Tpo .deps/autogrid4-read_parameter_library.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-parse_param_line.o -MD -MP -MF .deps/autogrid4-parse_param_line.Tpo -c -o autogrid4-parse_param_line.o `test -f 'parse_param_line.cpp' || echo './'`parse_param_line.cpp
mv -f .deps/autogrid4-parse_param_line.Tpo .deps/autogrid4-parse_param_line.Po
g++ -DPACKAGE_NAME=\"autogrid\" -DPACKAGE_TARNAME=\"autogrid\" -DPACKAGE_VERSION=\"4.0.0\" -DPACKAGE_STRING=\"autogrid\ 4.0.0\" -DPACKAGE_BUGREPORT=\"autodock at scripps.edu\" -DPACKAGE=\"autogrid\" -DVERSION=\"4.0.0\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 -DHAVE_GETHOSTNAME=1 -DHAVE_POW=1 -DHAVE_ROUND=1 -DHAVE_SQRT=1 -DHAVE_STRNCASECMP=1 -I.  -I./../autodock-4.0.1  -Wall -O3  -g -O2 -MT autogrid4-distdepdiel.o -MD -MP -MF .deps/autogrid4-distdepdiel.Tpo -c -o autogrid4-distdepdiel.o `test -f 'distdepdiel.cpp' || echo './'`distdepdiel.cpp
mv -f .deps/autogrid4-distdepdiel.Tpo .deps/autogrid4-distdepdiel.Po
g++ -Wall -O3  -g -O2   -o autogrid4 autogrid4-main.o autogrid4-check_size.o autogrid4-setflags.o autogrid4-timesys.o autogrid4-timesyshms.o autogrid4-printhms.o autogrid4-prHMSfixed.o autogrid4-printdate.o autogrid4-strindex.o autogrid4-banner.o autogrid4-gpfparser.o autogrid4-parsetypes.o autogrid4-atom_parameter_manager.o autogrid4-read_parameter_library.o autogrid4-parse_param_line.o autogrid4-distdepdiel.o  -lm 
autogrid4-main.o: In function `main':
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/main.cpp:675: relocation truncated to fit: R_M32R_24_RELA against `.bss'
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/main.cpp:676: relocation truncated to fit: R_M32R_24_RELA against `.bss'
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/main.cpp:693: relocation truncated to fit: R_M32R_24_RELA against `.bss'
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/main.cpp:1193: relocation truncated to fit: R_M32R_24_RELA against `.bss'
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/main.cpp:1194: relocation truncated to fit: R_M32R_24_RELA against `.bss'
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/main.cpp:1208: relocation truncated to fit: R_M32R_24_RELA against `.bss'
autogrid4-check_size.o: In function `__static_initialization_and_destruction_0':
/usr/lib/gcc/m32r-linux-gnu/4.1.2/../../../../include/c++/4.1.2/iostream:76: relocation truncated to fit: R_M32R_24_RELA against `.bss'
autogrid4-check_size.o: In function `__tcf_0':
/usr/lib/gcc/m32r-linux-gnu/4.1.2/../../../../include/c++/4.1.2/iostream:76: relocation truncated to fit: R_M32R_24_RELA against `.bss'
autogrid4-atom_parameter_manager.o: In function `apm_find(char const*)':
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/atom_parameter_manager.cpp:55: relocation truncated to fit: R_M32R_24_RELA against `.bss'
autogrid4-atom_parameter_manager.o: In function `apm_enter(char const*, parameter_entry)':
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/atom_parameter_manager.cpp:47: relocation truncated to fit: R_M32R_24_RELA against `.bss'
/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0/atom_parameter_manager.cpp:50: additional relocation overflows omitted from the output
collect2: ld returned 1 exit status
make[1]: *** [autogrid4] Error 1
make[1]: Leaving directory `/build/buildd2/autodocksuite-4.0.1/src/autogrid-4.0.0'
make: *** [build-arch-stamp] Error 2
dpkg-buildpackage: failure: debian/rules build gave error exit status 2
******************************************************************************
Build finished at 20080905-1432
FAILED [dpkg-buildpackage died]
------------------------------------------------------------------------------
  /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install libqt4-qt3support libkrb5-dev libcupsys2-dev libqt4-sql libmysqlclient15
Reading package lists...
Building dependency tree...
Reading state information...
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:

The following packages have unmet dependencies:
  libcupsys2-dev: Depends: libcups2-dev but it is not installable
E: Broken packages
apt-get failed.
Failed to reinstall removed packages!
******************************************************************************
Finished at 20080905-1434
Build needed 00:59:33, 12760k disk space




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